П.А. Васёв, В.Л. Авербух, М.О. Бахтерев, Д.В. Манаков, Д.Ю. Филоненко, М.А. Форгани, Cцены визуализации в вычислительных блокнотах // Труды 28-й Международной конференции по компьютерной графике и машинному зрению, Томск, 24–27 сентября 2018 г.

pdf В работе описан феномен вычислительных блокнотов и современное состояние визуализации в них. Проведен анализ сложившегося состояния в контексте визуального программирования. Представлена реализация визуального программирования сцен визуализации для блокнотов. Подробнее...

П. А. Васёв, М. О. Бахтерев, М. А. Форгани, Д. Ю. Филоненко, Интерактивная визуализация вычислений в веб-среде // СОВРЕМЕННЫЕ ПРОБЛЕМЫ МАТЕМАТИКИ И ЕЁ ПРИЛОЖЕНИЙ, тезисы Международной (49-й Всероссийской) молодёжной школы-конференции, г. Екатеринбург, 4-10 февраля 2018 г., стр. 56.

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Forghani M., Vasev P., Averbukh V., Three-Dimensional Visualization for Phylogenetic Tree // Scientific Visualization. 2017. Quarter. 4, Vol. 9, N 4. Pp. 59 – 66. DOI: http://doi.org/10.26583/sv.9.4.06

//file.lact.ru/f1/s/0/299/basic/1606/24/Corrected-1pdf?t=1511172410 Phylogenetic trees are used to demonstrate the evolutionary relationship between species. Previous researches had indicated there is correlation between mutation and physico-chemical properties changes of amino acid. Considering the physico-chemical changes in protein provides additional viewpoints to study process of mutation. Подробнее...

Vladimir Averbukh, Alexander Bersenev, Majid Forgani, Alexander Igumnov, Dmitry Manakov, Andrey Popel, Sergey Sharf, Pavel Vasev, Visualizing a Supercomputer: a Case of Objects Regrouping // Proceedings of the 29th International Conference on Computer Graphics and Vision. Bryansk, Russia, September 23-26, 2019. Pp. 74-76. doi.org/10.30987/graphicon-2019-2-74-76

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M. Forghani, S. Kovalev, P. Vasev and M. Bolkov, TBEV Analyzer: a Platform for Evolutionary Analysis of Tick-borne Encephalitis Virus // 2019 International Multi-Conference on Engineering, Computer and Information Sciences (SIBIRCON), Novosibirsk, Russia, 2019, pp. 0397-0402, doi: 10.1109/SIBIRCON48586.2019.8958021.

pdf Tick-borne encephalitis virus (TBEV) is a causative agent an extremely dangerous infectious disease, often characterized by damage to the central nervous system, which sometimes leads to serious health problems, such as disability and even death. Подробнее...

V. L. AverbukhI. O. Mikhailov, M. A. Forghani, P. A. Vasev, 3D Visualization to Analyze Multidimensional Biological and Medical Data // In: Pinelas S., Kim A., Vlasov V. (eds) Mathematical Analysis With Applications. CONCORD-90 2018. Springer Proceedings in Mathematics & Statistics, vol 318. Springer, Cham, pp 241-251. https://doi.org/10.1007/978-3-030-42176-2_24

pdf Biological and medical databases continue to grow in size, volume, and dimension that lead to facing big data issues. The data obtained as a result of complex computer modeling, as well as in analyzing various sources of big data are complex and poorly structured. Подробнее...

Averbukh, N. Averbukh, P. Vasev, I. Gvozdarev, G. Levchuk, I. Starodubtsev, M. Forghani, Virtual reality as an instrument of computer visualization // IEEE Xplore Digital Library. 2019. International Multi-Conference on Engineering, Computer and Information Sciences (SIBIRCON), Novosibirsk, Tomsk, Ekaterinburg, 21-27 Oct 2019 : proceedings. P. 0786-0792. DOI: 10.1109/SIBIRCON48586.2019.8957854

pdf pdf The paper is devoted to the development of computer visualization systems based on virtual reality. Some of these systems are designed for scientific visualization and some of them are designed for software visualization. Подробнее...

P.Vasev, S.Porshnev, M.Forghani, D.Manakov, M.Bakhterev, I.Starodubtsev, Constructing 3D Scenes of Scientific Visualization Using CinemaScience Format // Proceedings of the 31st International Conference on Computer Graphics and Vision, September 27–30, 2021, Nizhny Novgorod, Russia. P.296-307. CEUR Workshop proceedings: http://ceur-ws.org/Vol-3027/ DOI: doi.org/10.20948/graphicon-2021-3027-296-307

pdf To visualize any new entity, a visualization should be designed and programmed. Investigating approaches for programming new scientific visualizations, we come to the following idea: utilize CinemaScience format to describe 3D scenes. Подробнее...

Vasev, P., Porshnev, S., Forghani, M., Manakov, D., Bakhterev, M., & Starodubtsev, I., An experience of using CinemaScience format for 3D scientific visualization // Scientific Visualization, 13(4), 127-143. DOI: https://doi.org/10.26583/sv.13.4.10

pdf To visualize any new entity, a visualization algorithm should be designed and programmed. Investigating approaches for programming new scientific visualizations, we come with the following technique: utilize CinemaScience format to describe 3D scenes. Подробнее...

M.Forghani, P.Vasev, E.Ramsay, A.Bersenev, Visualization of the Evolutionary Path: an Influenza Case Study // Proceedings of the 31st International Conference on Computer Graphics and Vision, September 27–30, 2021, Nizhny Novgorod, Russia. P.358-368. Published on CEUR Workshop Proceedings, ISSN 1613-0073, DOI: doi.org/10.20948/graphicon-2021-3027-358-368

pdf Visualization of viral evolution is one of the essential tasks in bioinformatics, through which virologists characterize a virus. The fundamental visualization tool for such a task is constructing a dendrogram, also called the phylogenetic tree. Подробнее...

M.Forghani, S.Kovalev, M.Bolkov, M.Khachay, P.Vasev, TBEV analyzer platform for evolutionary analysis and monitoring tick-borne encephalitis virus: 2020 update // Biostatistics & Epidemiology, 1-17. DOI: doi.org/10.1080/24709360.2021.1985392

Viral surveillance is an essential task in public health that yields specific data, such as biological and epidemiological characteristics, crucial in the fight against viruses. Подробнее...

М.А. Форгани, А.В. Кожевин, Классификация вейвлетов для удаления шума из сигнала нормальной кардиограммы // Труды международной научной конференции “Параллельные Вычислительные Технологии” (ПаВТ'2015). Екатеринбург, 31 марта - 2 апреля 2015. Челябинск, Издательский центр ЮУрГУ. 2015. Стр. 527.

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Pavel Vasev, Mikhail Bakhterev, Dmitry Manakov, Sergey Porshnev, Majid Forghani, On Expressiveness of Visualization Systems' Interfaces // Scientific Visualization, 2022, 14.5: 77-95, DOI: 10.26583/sv.14.5.06

pdf The paper discusses elements of logical models of graphical user interfaces used in both universal and specialized scientific visualization systems. Criteria of expressiveness of programming language that are discussed in “Structure and Interpretation of Computer Programs” book are applied to graphical interfaces. Подробнее...

Форгани М., Васёв П.А., Болков М.А., Рэмзи Э.С., Берсенев А.Ю., PHYLOTRAVIS: НОВЫЙ ПОДХОД К ВИЗУАЛИЗАЦИИ ФИЛОГЕНЕТИЧЕСКОГО ДЕРЕВА // Программирование. 2022. №3. С. 78-91. DOI: 10.31857/S0132347422030049

pdf Изучение эволюции является необходимой задачей при прогнозирования изменчивости вида, и особенно для таких патогенов, как вирусы. Один из основных этапов эволюционного анализа это построение филогенетического дерева. Подробнее...

Forghani M., Vasev P.A., Bolkov M.A., Ramsay E.S., Bersenev A.Y., PhyloTraVis: A New Approach to Visualization of the Phylogenetic Tree // Programming and Computer Software. 2022. Vol. 48, № 3. P. 215-226. DOI: 10.1134/S0361768822030045

pdf The study of evolution is an essential task in predicting the variability of species, especially for pathogens such as viruses. One of the main stages of evolutionary analysis is constructing a phylogenetic tree. Подробнее...